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Epitope Prediction

Protean 3D includes epitope prediction methods that allow you to predict B-cell epitopes based on protein sequence data. You can then view predicted epitopes and antigenic regions along your sequence and structure and compare predictions to other characteristics, such as surface probability. Protean 3D also allows you to:

  • Create molecular and solvent accessible surfaces around your structure and view predicted epitopes relative to the protein surface
  • View confidence scores for predicted antigenic regions
  • Change appearance of predicted epitopes on the sequence and structure for optimized visualization

    • PDF Icon White Paper: Precise Predictions of Linear B Cell Epitopes in Protean 3D

     

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    For an overview of this workflow, please see the brief video below: