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Creating Custom VCF and BED Files

03/06/2015 by Jackie Carville
DNASTAR_Clinical_logo_4c_icon

For those working with gene panels or performing validation control workflows, BED and VCF files are integral to the entire process.  In fact, through the Genome in a Bottle Consortium (GIAB), the National Institute of Standards and Technology (NIST) has … Continue reading →

Discovery of Gene Candidates from NGS Data Using A Researcher Friendly Pipeline and Filters

11/20/2014 by Kerri Phillips
Kabuki Filtering Diagram

In the past decade, the ability to determine complex mechanisms underlying disease has been made easier by a variety of factors, especially the availability of large amounts of data. In fact, with the continuously decreasing costs of obtaining whole exome … Continue reading →

Using Cloud Computing for NGS Assemblies

11/10/2014 by Jackie Carville
Cloud computing

Next-generation sequencing technologies have reduced the cost and increased the speed of DNA sequencing so significantly that the resulting volume of sequencing data is challenging the traditional approaches to data analysis. This issue of processing can be addressed through innovative … Continue reading →

GIAB Use Case: Bringing NA12878 Call Sets to Kidney Disease

10/07/2014 by Kerri Phillips
Figure 1. DNASTAR’s integrated Validated SNP Caller workflow used with NIST GIAB gold standard reference materials.

Nephropath™ incorporates DNASTAR pipeline for validating processes against NIST “gold standard.”   The resources provided by the National Institute of Standards and Technology (NIST) Genome in a Bottle (GIAB) consortium promise to greatly improve the reliability of genetic assays. With … Continue reading →

Things to consider when selecting sequence assembly and analysis software

09/18/2014 by Jackie Carville
typing hands

Today’s marketplace is overflowing with different bioinformatics software solutions. How do you begin to parse through the available options to find the perfect next-gen sequence assembly and analysis software for your project? Here are five considerations when it comes to … Continue reading →

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Follow Us:
  • WHAT'S NEW?
  • Software
    • DNASTAR Lasergene
    • Molecular Biology
    • Genomics
    • Structural Biology
  • NovaCloud
  • DNASTAR Cloud
  • Contact Us
    • Company Profile
    • Careers
    • Distributors
    • Event Schedule
    • Legal Information
    • Press Releases
    • Privacy Statement
    • Download Free Trial
    • Request Educational Software
    • Request Quote
  • Molecular Biology
    • Cloning
    • Gene Discovery
    • Plasmid Auto-Annotation
    • Primer Design
    • Sanger Sequence Assembly
    • Sequence Alignment
  • Genomics
    • Automated Genome Closure
    • De Novo Genome Assembly
    • Genomic Visualization
    • Mendelian Gene Panels and Exome Analysis
    • Metagenomic Assembly with Host Removal
    • Reference Guided Genome Alignment
    • SNP Validation Control
    • Variant Analysis
  • Transcriptomics
    • ChIP-Seq Analysis
    • Combined Analysis for NGS Projects
    • De Novo Transcriptome Assembly
    • RNA-Seq Alignment
  • Clinical Research
    • Association Studies
    • Cancer Genomics
    • Gene Panels
    • Microarray Gene Expression Analysis
    • NGS Assembly with Sanger Validation
  • Structural Biology
    • Antibody Modeling
    • Epitope Prediction
    • Molecular Motion Visualization
    • Protein Docking
    • Protein Sequence & Structure
    • Protein Structure Prediction
    • Structural Alignment
  • NGS Support Materials
    • #1 in NGS Accuracy
    • Genome Template Packages
    • Benchmarks
    • Supported Sequencing Technologies
    • dbNSFP Gene Level Annotations
  • Services
    • Genome Assembly
    • Structure Prediction
  • Support
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