February 2015 Publications

iStock_000012734320SmallEvery year for the last 30 years, more researchers have cited DNASTAR’s software in scientific journals than any other sequence analysis software.

 

Featured here is a sampling of publications so far in 2015. Check back each month for an update on the latest publications citing DNASTAR tools.

 

Share your publication with us, and we will post it here! Contact Jackie Carville for details at carvillej@dnastar.com or cite DNASTAR in your publications.

 

February 2015  Publications

 

Early and delayed long-term transcriptional changes and short-term transient responses during cold acclimation in olive leaves

María de la O Leyva-Pérez, Antonio Valverde-Corredor, Raquel Valderrama, Jaime Jiménez-Ruiz, Antonio Muñoz-Merida, Oswaldo Trelles, Juan Bautista Barroso, Jesús Mercado-Blanco, and Francisco Luque

DNA Research, February 2015; 22: 1-11

ArrayStar and QSeq were used for gene expression studies and RNA-seq analysis.

 

Interrogation of Chesapeake Bay sediment microbial communities for intrinsic alkane-utilizing potential under anaerobic conditions

Jamie M. Johnson, Boris Wawrik, Catherine Isom, Wilford B. Boling and Amy V. Callaghan

FEMS Microbiology Ecology, February 2015; 91

MegAlign was used for sequence translation and alignment.

 

Analyses of Alternatively Processed Genes in Ciliates Provide Insights into the Origins of Scrambled Genomes and May Provide a Mechanism for Speciation

Feng Gao, Scott W. Roy, Laura A. Katz

mBio, February 2015; 6

SeqMan Pro was used for contig assembly, and MegAlign for sequence alignments.

 

A GntR-type transcriptional repressor controls sialic acid utilization in Bifidobacterium breve UCC2003

Muireann Egan, Mary O’Connell Motherway and Douwe van Sinderen

FEMS Microbiology Letters, February 2015; 362

SeqBuilder and SeqMan Pro were used for sequence analysis

 

Mitochondrial Single Nucleotide Polymorphisms in Ceratitis capitata (Diptera:  Tephritidae) Can Distinguish Sterile, Released Flies from Wild Flies in Various Regions of the World

Arlene Parubrub, Ruel Reyes, Catherine J. Smallridge, Bill Woods, and David Haymer

Journal of Economic Entomology, February 2015; 180:  301-306

MegAlign was used for sequence alignment and analysis.

 

Expression Profiles of the Heat Shock Protein 70 Gene in Response to Heat Stress in Agrotis c-nigrum (Lepidoptera: Noctuidae)

Ling Wang, Shuai Yang, Kuijun Zhao, and Lanlan Han

Journal of Insect Science, Feburary 2015; 15

DNASTAR software was used for sequence analysis.

 

Incrimination of Aedes (Stegomyia) hensilli Farner as an Epidemic Vector of Chikungunya Virus on Yap Island, Federated States of Micronesia, 2013

Harry M. Savage, Jeremy P. Ledermann, Laurence Yug, Kristen L. Burkhalter, Maria Marfel, and W. Thane Hancock

The American Journal of Tropical Medicine and Hygiene, February 2015; 92:  429-436

Lasergene was used for Sanger sequence assembly and analysis.

 

Segregation of a Spontaneous Klrd1 (CD94) Mutation in DBA/2 Mouse Substrains

Dai-Lun Shin, Ashutosh K. Pandey, Jesse Dylan Ziebarth, Megan K. Mulligan, Robert W. Williams, Robert Geffers, Bastian Hatesuer, Klaus Schughart, and Esther Wilk

G3, February 2015; 5:  235-239

MegAlign was used for sequence alignment.