October 2014 Publications

iStock_000012734320SmallEvery year for the last 28 years, more researchers have cited DNASTAR’s software in scientific journals than any other sequence analysis software.


Featured here is a sampling of publications so far in 2014. Check back each month for an update on the latest publications citing DNASTAR tools.


Share your publication with us, and we will post it here! Contact Jackie Carville for details at carvillej@dnastar.com or cite DNASTAR in your publications.


October 2014 Publications

Early and delayed long-term transcriptional changes and short-term transient responses during cold acclimation in olive leaves

Maríade la O Leyva-Pérez, Antonio Valverde-Corredor, Rasquel Valderrama, Jaime Jiménez-Ruiz, Antonio Muñoz-Merida, Oswaldo Trelles, Juan Bautista Barroso, Jesús Mercado-Blanco, and Francisco Luque

DNA Research, October 2014; 1-11

ArrayStar was used for gene expression analysis of RNA-Seq data.


SNPs in gene functional in starch-sugar interconversion associate with natural variation of tuber starch and sugar content of potato (Solanum tuberosum L.)

Lena Schreiber, Anna Camila Nader-Nieto, Elske Maria Schönhals, Birgit Walkemeier, and Christiane Gebhardt

G3, October 2014; 4:  1797-1811

DNASTAR software was used to assemble and analyze cDNA sequences for RNA-Seq analysis.


Duplicate and conquer:  multiple homologs of PHOSPHORUS-STARVATION TOLERANCE1 enhance phosphorus acquisition and sorghum performance on low-phosphorus soils

Barbara Hufnagel, Sylvia M. de Sousa, Lidianne Assis, Claudia T. Guimares, Willmar Leiser, Gabriel C. Azevedo, Barbara Negri, Brandon G. Larson, Jon E. Shaff, Maria Marta Pastina, Beatriz A. Barros, Eva Weltzien, Henry Frederick W. Rattunde, Joao H. Viana, Randy T. Clark, Alexandre Falcão, Rodrigo Gazaffi, Antonio Augusto F. Gracia, Robert E. Schaffert, Leon V. Kochian, and Jurandir V. Magalhaes

Plant Physiology, October 2014; 166:  659-677

MegAlign was used for sequence alignment.


Roussoella percutanea, a novel opportunistic pathogen causing subcutaneous mycoses

Sarah A. Ahmed, David A. Stevens, Wendy W. J. van de Sande, Jacques F. Meis, and G. S. de Hoog

Medical Mycology, October 2014; 52:  689-698

SeqMan Pro was used for sequence editing.


Mycobacterium abscessus infection in cystic fibrosis:  molecular typing and clinical outcomes

Kathryn A. Harris and Dervla T. D. Kenna

Journal of Medical Microbiology, October 2014; 63:  1241-1246

MegAlign was used for sequence alignment and phylogenetic tree analysis.