Publications Citing Lasergene for RNA-Seq Analysis

RNASeq

Did you know DNASTAR software has been cited in over 52,000 peer-reviewed publications? Every year for the past 31 years, our software has been cited in peer reviewed publications more than any competitor’s software.

 

Featured here are some recent publications citing Lasergene for RNA-Seq analysis.
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Transcriptome and Secretome Analyses of the Wood Decay Fungus Wolfiporia cocos Support Alternative Mechanisms of Lignocellulose Conversion
Gaskell, Jill, Robert A. Blanchette, Philip E. Stewart, Sandra Splinter Bondurant, Marie Adams, Grzegorz Sabat, Phil Kersten, and Dan Cullen. Applied and Environmental Microbiology Appl. Environ. Microbiol. 82, no. 13 (2016): 3979-987. doi:10.1128/aem.00639-16.

 

 

Identification of Genome-Wide Variants and Discovery of Variants Associated with Brassica rapa Clubroot Resistance Gene Rcr1 through Bulked Segregant RNA Sequencing
Yu, Fengqun, Xingguo Zhang, Zhen Huang, Mingguang Chu, Tao Song, Kevin C. Falk, Abhinandan Deora, Qilin Chen, Yan Zhang, Linda Mcgregor, Bruce D. Gossen, Mary Ruth Mcdonald, and Gary Peng. PLOS ONE PLoS ONE11, no. 4 (2016). doi:10.1371/journal.pone.0153218.

 

 

FOXE3 Contributes to Peters Anomaly through Transcriptional Regulation of an Autophagy-associated Protein Termed DNAJB1
Khan, Shahid Y., Shivakumar Vasanth, Firoz Kabir, John D. Gottsch, Arif O. Khan, Raghothama Chaerkady, Mei-Chong W. Lee, Carmen C. Leitch, Zhiwei Ma, Julie Laux, Rafael Villasmil, Shaheen N. Khan, Sheikh Riazuddin, Javed Akram, Robert N. Cole, C. Conover Talbot, Nader Pourmand, Norann A. Zaghloul, J. Fielding Hejtmancik, and S. Amer Riazuddin. Nature Communications Nat Comms 7 (2016): 10953. doi:10.1038/ncomms10953.

 

 

Expression Patterns of Cysteine Peptidase Genes across the Tribolium castaneum Life Cycle Provide Clues to Biological Function
Perkin, Lindsey, Elena N. Elpidina, and Brenda Oppert. PeerJ 4 (2016). doi:10.7717/peerj.1581.

 

 

TauCstF-64 Mediates Correct MRNA Polyadenylation and Splicing of Activator and Repressor Isoforms of the Cyclic AMP-Responsive Element Modulator (CREM) in Mouse Testis
Grozdanov, P. N., A. Amatullah, J. H. Graber, and C. C. Macdonald. Biology of Reproduction 94, no. 2 (2015): 34. doi:10.1095/biolreprod.115.134684.

 

 

Genes Related to Mitochondrial Functions Are Differentially Expressed in Phosphine-resistant and -susceptible Tribolium castaneum
Oppert, Brenda, Raul N. C. Guedes, Michael J. Aikins, Lindsey Perkin, Zhaorigetu Chen, Thomas W. Phillips, Kun Yan Zhu, George P. Opit, Kelly Hoon, Yongming Sun, Gavin Meredith, Kelli Bramlett, Natalie Supunpong Hernandez, Brian Sanderson, Madison W. Taylor, Dalia Dhingra, Brandon Blakey, Marcé Lorenzen, Folukemi Adedipe, and Frank Arthur. BMC Genomics16, no. 1 (2015). doi:10.1186/s12864-015-2121-0.

 

 

Alterations in Mc1r Gene Expression Are Associated with Regressive Pigmentation in Astyanax Cavefish
Stahl, Bethany A., and Joshua B. Gross. Development Genes and Evolution Dev Genes Evol 225, no. 6 (2015): 367-75. doi:10.1007/s00427-015-0517-0.

 

 

Natural Bone Fragmentation in the Blind Cave-dwelling Fish, Astyanax mexicanus : Candidate Gene Identification through Integrative Comparative Genomics
Gross, Joshua B., Bethany A. Stahl, Amanda K. Powers, and Brian M. Carlson. Evolution & Development 18, no. 1 (2015): 7-18. doi:10.1111/ede.12131.

 

 

Deficiency of the Ferrous Iron Transporter FeoAB Is Linked with Metronidazole Resistance in Bacteroides fragilis
Veeranagouda, Y., F. Husain, R. Boente, J. Moore, C. J. Smith, E. R. Rocha, S. Patrick, and H. M. Wexler. Journal of Antimicrobial Chemotherapy 69, no. 10 (2014): 2634-643. doi:10.1093/jac/dku219.

 

 

RNA Amplification for Pseudogene Detection Using RNA-Seq
Tsoi, Stephen C. M., and Michael K. Dyck. Methods in Molecular Biology Pseudogenes, 2014, 119-27. doi:10.1007/978-1-4939-0835-6_9.

 

 

Transcriptome Analysis of Listeria monocytogenes Exposed to Biocide Stress Reveals a Multi-system Response Involving Cell Wall Synthesis, Sugar Uptake, and Motility
Casey, Aidan, Edward M. Fox, Stephan Schmitz-Esser, Aidan Coffey, Olivia Mcauliffe, and Kieran Jordan. Front. Microbiol. Frontiers in Microbiology 5 (2014). doi:10.3389/fmicb.2014.00068.

 

 

Evaluation of Ribosomal RNA Removal Protocols for Salmonella RNA-Seq Projects
Bhagwat, Arvind A., Z. Irene Ying, and Allen Smith. Advances in Microbiology AiM 04, no. 01 (2014): 25-32. doi:10.4236/aim.2014.41006.

 

 

Global Gene Expression Profiling of Monocyte-derived Macrophages from Red Deer (Cervus elaphus) Genotypically Resistant or Susceptible to Mycobacterium Avium Subspecies Paratuberculosis Infection
Marfell, Brooke J., Rory O’Brien, and J. Frank T. Griffin. Developmental & Comparative Immunology 40, no. 2 (2013): 210-17. doi:10.1016/j.dci.2013.02.004.