The following table describes ways to modify an initial multiple alignment:
| Task | See this topic |
|---|---|
| To realign a range of aligned sequences using different parameters or a different alignment engine | Subalign sequences |
| To merge two existing completed alignments together | Merge two existing alignments (“Profile alignment”) |
| To add all/selected sequences from the “Unaligned Sequences” area into the current alignment, while retaining all of the gaps of the original, pre-merge alignment | Merge unaligned sequences into an existing alignment |
| To realign existing aligned sequences PLUS selected unaligned sequences | Align selected unaligned sequences with an existing alignment |
The following video illustrates some of these modification procedures:
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