The following commands can be used in the script for an SNG assembly. Click on the name of a command in the table below (shown in alphabetical order) to see a description and example, and to see the parameters associated with that command. All SNG commands and parameters are assumed to be optional unless the description states that it is required.
To see how SNG commands and parameters map to equivalent SeqMan NGen wizard settings, see Equivalence between wizard settings and SNG scripting commands.
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