QSeq’s ChIP-Seq workflow enables you to locate the binding sites of DNA-associated proteins and determine how these proteins interact with the DNA to affect expression in nearby genes.

In this tutorial, you will use SeqMan NGen to create a ChIP-Seq assembly for two experimental replicates and one wild type control of E. coli transcription factor FlhD. Once the assembly is complete, you will import the data into ArrayStar’s ChIP-Seq workflow for analysis.

Begin with Part A: Creating the ChIP-Seq assembly in SeqMan NGen.

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