The Layout tab of the Analysis Options dialog is used to set parameters for the layout phase of the assembly. To access the tab from the Analysis Options screen, click the Advanced Analysis Options button then click on the Layout tab. The options available in this tab may vary depending on the workflow.
|Alignment-based layout refinement||If you are following a whole-genome workflow, checking this button may improve the accuracy of the assembly.|
|Layout Stringency|| Choose from the following:
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