The pairFilePattern command allows you to specify the pattern for pair files using the GREP language.
Example:
pairFilePattern
forward: “(?‘name’.*)_R1_(?‘ext’.*)\fastq
reverse: “(?‘name’.*)_R2_(?‘ext’.*)\fastq
| Parameter | Description | Allowed values |
|---|---|---|
| forward | A naming pattern to match forward clones. | [text string enclosed in quotes] |
| reverse | A naming pattern to match reverse clones. | [text string enclosed in quotes] |
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