Variants tracks

If you are viewing an assembly created in SeqMan NGen, you can add a Variants track to the Analysis view using the method described in Work with Tracks. Briefly, you can display this track by opening the Tracks panel and checking one or more of the boxes to the left of Analysis body > Variants > (sample names).

You may need to use the green horizontal zoom slider to see the variants clearly. The styles used to represent each type of variant are controlled by choices made in the Variants section of the Style panel.

To resize the track vertically, use the slider that appears if you hover over the bottom middle of the track data. You can also resize the track and change the amount of white space above/below the track using sliders in the Layout section.