To export data from the Variants view in .csv or .tab format:
- Select a contig in the Explorer panel and open the Variants view.
- Use this tool (
![]()
) to filter the table to include the variants of interest.
) to - Choose or rearrange columns using the gear tool (
![]()
).
).- Click the Export data tool (
![]()
).
).
Exporting variant data for use in ArrayStar:
If you plan to open the variant table in ArrayStar, you must include the following data columns in Step 3, above:
- Contig ID
- Contig Pos
- Ref Pos
- Type
- Ref Base
- either SNP Base or Called Base
- SNP%
If you wish to determine coding vs. non-coding regions or synonymous vs. non-synonymous changes in ArrayStar, you must also export the following columns:
- Genotype
- Feature Name
- Feature Type
- either Codon or Protein Change
Need more help with this?
Contact DNASTAR