Sample-alignment track

The Sample-alignment track can be displayed in the Alignment view and displays sample alignment under a consensus for a multi-sample assembly. To display the track, you must check the Alignment reads >Sample-alignment box in the Tracks panel and also click the associated plus sign (if any) in the Alignment view. Note that the track will not appear unless the project involves a multi-sample assembly.

To change Sample-alignment track options:

Currently, the Sample-alignment track does not have editable options. However, you can add white space above and/or below the track using sliders in the Layout section.