Project Overview is one of several Project Report views that may be available, depending on the assembly type that is currently open.
To access the view, choose View > Project Report > Project Overview.
The available parameters differ depending on the type of assembly project.
|Contig N50||A weighted median statistic such that 50% of the entire assembly is contained in contigs or scaffolds equal to or larger than this value.|
|Largest contig size||The length of the longest contig in bp.|
|Number of contigs||The number of contigs in the finished assembly.|
|Reads assembled||The number of reads that were used in the finished assembly.|
|Average coverage||Average depth of coverage along the assembly.|
|Number of references||Number of reference sequences used.|
|Aligned sequences||Number and percentage of sequences used in the finished alignment.|
|Number of variants||Number of variants found.|
|Variant assemblies||For multi-sample assemblies only. The number of assemblies in the project.|
To export data from this view, press the Export data tool ( ) in the top right of the view. This opens a save dialog in which you can save the tabular data in comma-separated (.csv) or tab-separated (.tab) format.
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