The Track Options section is located in the Tracks panel and provides an editable display of options for a selected Protean 3D track.
Opening the Track Options section:
Do either of the following:
- Click the expand bar entitled “Options”
- Use View > Tracks > Options
The Track Options sectionis only active when a document is open in the Protean 3D application window and when a method has been selected in the Tracks panel.
Using the Track Options section:
This section contains very different options, depending on the selected track. An example is shown below:
To learn about options available for specific tracks, see:
| Biophysics tracks | Immunogenicity tracks | Database tracks | Other track types |
|---|---|---|---|
| Amphiphilicity Charge Density Disorder (JRONN) Flexibility Hydropathy: Hopp-Woods Kyte-Doolittle Parker Secondary structure: Chou-Fasman Deleage-Roux Garnier-Robson Coiled coil Stability: Aliphatic index Instability index Isoelectric precipitate Surface probability Transmembrane: Goldman-Engleman-Steitz TopPred von Heijne |
B-cell epitopes MHC II epitopes Antigencity: Jameson-Wolf Welling T-cell epitopes: AMPHI Rothbard-Taylor |
Cleavage sites Domains & sites |
Modifications Features NovaFold-related |
To return to the default settings for any Track Options dialog, click 
.
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