Like you, we don’t have time to sit in front of our computers all day editing or annotating huge lists of sequences. That’s why we developed SeqNinja, an effortless way to batch edit genome sequences and annotations. SeqNinja can finish a day’s worth of sequence editing in just a few minutes!
SeqNinja supports a variety of input/output file types and provides you with customizable templates for both common and uncommon protein and DNA sequence editing functions. With SeqNinja, you can quickly translate, reverse complement, or convert huge numbers of sequences from one format to another. Copy annotations between similar sequences or versions, merge and split sequence data, adjust sequence coordinates, and correct base-level errors without negatively impacting existing annotations. SeqNinja can even locate genes of interest to you from within a list of sequences, then save those genes in a separate file.
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Please see our resources below for more information on the batch sequencing editing tools in SeqNinja.
What types of sequence editing can I do with SeqNinja?
SeqNinja offers numerous ways to edit sequences, either individually or as a group, including:
- Adding annotations
- Resetting the origin of circular sequences
- Merging groups of sequences into a single file
- Combining two or more sequences into a single, new sequence
- Converting file types
- Inserting new characters
- Extracting a set of annotated features
- Reverse complementing
What types of files can I use in SeqNinja?
SeqNinja supports importing FASTA, GenBank, DNA Multi-Seq, and VCF files, as well as Lasergene .seq and .pro files. See our File Formats resource for a complete list of supported file types.
Compare DNASTAR Lasergene Packages
|MOST POPULARDNASTAR Lasergene|
|Lasergene Molecular Biology||Lasergene Genomics||Lasergene Protein|
(+1 prediction per Nova Application)
|Automated Virtual Cloning|
|Clone Sequence Verification|
|Gel Electrophoresis Simulation|
|Mauve Genome Alignment|
|Multiple Sequence Alignment|
|Pairwise Sequence Alignment|
|PCR Primer Design|
|PCR Site-Directed Mutagenesis|
|Sequence Editing and Annotation|
|Sanger Sequence Assembly|
|ChIP-Seq Data Analysis|
|De Novo Transcriptome Assembly|
|Large Scale Variant Analysis|
|NGS De Novo Genome Assembly|
|Whole Exome/Genome Sequencing|
|Protein Sequence Analysis|
|Protein Stability Prediction|
|Protein Structural Alignment|
|Protein Structure Analysis|
|Protein Structure Prediction|
|DNASTAR Cloud Data Drive|
|DNASTAR Cloud Assemblies|
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