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SEQNINJA

A utility for advanced editing of genome sequences and annotations.

Home » DNASTAR Bioinformatics Software » DNASTAR Lasergene » SeqNinja

SeqNinja

Like you, we don’t have time to sit in front of our computers all day editing or annotating huge lists of sequences. That’s why we developed SeqNinja, an effortless way to batch edit genome sequences and annotations. SeqNinja can finish a day’s worth of sequence editing in just a few minutes!

SeqNinja supports a variety of input/output file types and provides you with customizable templates for both common and uncommon protein and DNA sequence editing functions. With SeqNinja, you can quickly translate, reverse complement, or convert huge numbers of sequences from one format to another. Copy annotations between similar sequences or versions, merge and split sequence data, adjust sequence coordinates, and correct base-level errors without negatively impacting existing annotations. SeqNinja can even locate genes of interest to you from within a list of sequences, then save those genes in a separate file.

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SeqNinja

Learn more about SeqNinja

Resources   | FAQs   | Compare Packages

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Resources

Please see our resources below for more information on the batch sequencing editing tools in SeqNinja.

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SeqNinja Overview

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Translating all CDS Features in a Genome Using SeqNinja

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Handling Large Data Sets in SeqNinja

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SeqNinja Help and Tutorials

User Guide

FAQs

Which Lasergene package includes SeqNinja?

SeqNinja is included in Lasergene Molecular Biology  as well as in the complete DNASTAR Lasergene package which includes all of the applications from Lasergene Molecular Biology, Lasergene Protein, and Lasergene Genomics.

What types of sequence editing can I do with SeqNinja?

SeqNinja offers numerous ways to edit sequences, either individually or as a group, including:

  • Adding annotations
  • Resetting the origin of circular sequences…

SeqNinja offers numerous ways to edit sequences, either individually or as a group, including:

  • Adding annotations
  • Resetting the origin of circular sequences
  • Merging groups of sequences into a single file
  • Combining two or more sequences into a single, new sequence
  • Converting file types
  • Inserting new characters
  • Extracting a set of annotated features
  • Reverse complementing
  • Translating
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What types of files can I use in SeqNinja?

SeqNinja supports importing FASTA, GenBank, DNA Multi-Seq, and VCF files, as well as Lasergene .seq and .pro files. See our File Formats resource for a complete list of supported file types.

Compare DNASTAR Lasergene Packages

 MOST POPULARDNASTAR Lasergene
Lasergene Molecular BiologyLasergene GenomicsLasergene Protein
Included Applications
SeqBuilder Pro
SeqMan Ultra
MegAlign Pro
GeneQuest
GenVision
SeqNinja
SeqMan NGen
ArrayStar
GenVision Pro
Protean 3D
(+1 prediction per Nova Application)
DNASTAR Navigator
Supported Workflows
Antibody Phage Display
Automated Virtual Cloning
Clone Sequence Verification
Gel Electrophoresis Simulation
Mauve Genome Alignment
Multiple Sequence Alignment
Pairwise Sequence Alignment
PCR Primer Design
PCR Site-Directed Mutagenesis
Phylogenetic Analysis
Plasmid Maps
Sequence Editing and Annotation
Sanger Sequence Assembly
ChIP-Seq Data Analysis
Clinical Research
De Novo Transcriptome Assembly
Large Scale Variant Analysis
Metagenomic Assembly
NGS De Novo Genome Assembly
RNA-Seq Alignment
Viral Genome Analysis
Whole Exome/Genome Sequencing
Antibody Modeling
Epitope Prediction
Protein Docking
Protein Sequence Analysis
Protein Stability Prediction
Protein Structural Alignment
Protein Structure Analysis
Protein Structure Prediction
Integrates with
DNASTAR Cloud Data Drive
DNASTAR Cloud Assemblies 
NovaDock
NovaFold
NovaFold Antibody
Pricing
Annual pricing starting at:

$699/year
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$1,599/year
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$799/year
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$2,599/year
See Pricing
  

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