Software for Molecular Biology and Sequence Analysis

The Molecular Biology Suite is a comprehensive package of sequence analysis software, for DNA, RNA and protein sequence data. This package includes all the tools you need to perform multiple and pairwise sequence alignments, identify and annotate genes, assemble Sanger sequences, create virtual clones, design primers, concatenate sequences, find a reverse complement, perform an NCBI BLAST search, and more.

Cloning and Primer Design

The Molecular Biology Suite provides comprehensive cloning software and primer design software. Create primers and simulate clones with confidence using our highly accurate and easy-to-use software. For cloning projects, simply select your insert and vector sequences and restriction sites, and SeqBuilder Pro will automatically design PCR primers, recognize recombination sites, identify compatible restriction sites and construct the virtual clone for you. And when it comes to primer design, the software allows you to create PCR primers and primers for PCR-based cloning methods, as well as sequencing primers that can improve coverage or extend into gaps in a de novo assembly.

Buy SeqBuilder Pro as a standalone application online at seqbuilderpro.com or purchase the entire Molecular Biology Suite to receive the cloning capabilities in SeqBuilder Pro and more.

• Support for all major cloning methods, including Gibson Assembly, GeneArt, InFusion, Gateway and Gateway MultiSite, Directional TOPO, TA, and restriction enzyme digest cloning techniques

• New Cloning Summary view enables you to review details about the fragment inserts, primers, fragment junctions, as well as the steps needed to prepare the vector and amplify the insert

• Align Sanger reads to validate insert alignment and orientation of sequenced clones, with our Automated Clone Verification workflow

Buy SeqBuilder Pro as a standalone application online at seqbuilderpro.com or purchase the entire Molecular Biology Suite to receive the cloning capabilities in SeqBuilder Pro and more.

DNA, RNA and Protein Sequence Alignment

The MegAlign Pro application in the Molecular Biology Suite provides DNA, RNA, and protein sequence alignment using a range of pairwise and multiple aligning methods. From the sequence alignments generated, you can quickly create phylogenetic trees as well as reports and tables.

Gene Discovery and Feature Annotation

The Molecular Biology Suite provides automated annotation of plasmids and other sequences, using matches to a curated feature database, as well as gene discovery and annotation tools for novel sequences. Take advantage of our expertly curated database of common plasmid vector features and identify feature matches automatically with SeqBuilder Pro. The software also includes applications for identifying ORFs, spliced junctions, transcription factor binding sites and restriction sites, and for the identification of regions that match user defined DNA or protein sequences.