SeqMan NGen

Accurate Alignment and Assembly of GenomicSequencing Data

• Assemble genome and transcriptome data from all major NGS and Sanger sequencing platforms.
• Align RNA-Seq, ChIP-Seq, miRNA, exome and whole genome sequencing data, and any combination of various project types.
• Open results in SeqMan Pro for easy downstream analysis after assembly.

SeqMan Pro

Contig Assembly, Analysis + SNP Detection

• Discover SNPs and small indels using Bayesian statistical models.
• Identify large insertions and deletions, evaluate coverage, and annotate your consensus sequence.
• Visualize the orientation and distance between contigs.
• Take advantage of comprehensive variant analysis, including a wide range of available filters, and mutliplex support, allowing you to view variants on a per sample basis.

ArrayStar

Gene Expression and SNP Analysis

• Evaluate global gene expression experiments, compare sequence variation, analyze RNA-Seq, ChIP-Seq, CNV, miRNA, and more.
• Analyze variants using assembly projects and/or SNP data from VCF files.
• Utilize annotation data from dbSNP and other SNP and gene databases to enrich and filter variant data.
• Import oligonucleotide microarray and spotted array data.
• Isolate gene mutations of interest using graphically rich visualizations, and identify their biological significance.

GenVision Pro

Genomic Visualization Software

• Visualize genomic sequencing results with high-quality, highly-customizable images that are easily exported for publication.
• Browse and compare data sets for RNA-Seq, ChIP-Seq, CNV, exome and whole genome sequencing projects.
• Compare coverage and peak plots to interpret gene expression and regulation.
• Analyze mRNA isoforms and view coverage along exons in RNA-Seq data using Sashimi plots.